Rune Central

Heatseekinng rune, all weapons including BFG heatseek.
No clip rune.
More but I forgot.

How can I setup a server and add runes?

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You just got wrecked.

To set up server

download the rune server pack from runequake.com, and extract it into your quake folder on your server machine
copy and paste his example.cfg into your autoexc.cfg, next create a ban.txt file and a startmap.cfg file in your runequake directory
Now here's the next setp
go to dyndns.org and get a free ddns service like I did
mine is quakerune.dyndns.org

use another machine and install quake, and install proquake 3.5
then creat a shortcut to proquake 3.5 and place it on the desktop. Now right click on the wqpro.exe icon and add this -game runes -–dedicated 16 –condebug –heapsize 32768 –zone 1024 -uddport 26000 +map start

then login to your router, and set a static ip to your server computer such as 192.168.1.2. Then port range forward all udp ports to the machine your server 0-65535.
Now go to the ddns page, put all the information you got from your ddns service from dyndns.org into the fields in the router.

then test it with your quake client, try to connect from the ddns.

dynamicdns is used when you have a dynamic ip.